cnih1 cornichon family member 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cnih1provided by ZNC
Official Full Name: cornichon family member 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1944
See related: Ensembl:ENSDARG00000020311 AllianceGenome:ZFIN:ZDB-GENE-040426-1944
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cnih; zgc:56103; wu:fc21b06; wu:fi12c05; zgc:112228
Summary: Predicted to enable signaling receptor binding activity. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in membrane. Orthologous to human CNIH1 (cornichon family member 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (36595631..36606932)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (36469799..36481100)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fd61g08.y1 (e-PCR)
- UniSTS:195846

fc21b06.x1 (e-PCR)
- UniSTS:203861

fe02h11.y1 (e-PCR)
- UniSTS:195961

fc21b06.x1 (e-PCR)
- UniSTS:187797

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables signaling receptor binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein cornichon homolog 1

Names: cornichon family AMPA receptor auxiliary protein 1; cornichon homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.