cdin1 CDAN1 interacting nuclease 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cdin1provided by ZNC
Official Full Name: CDAN1 interacting nuclease 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-922
See related: Ensembl:ENSDARG00000070461 AllianceGenome:ZFIN:ZDB-GENE-060929-922
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb38f07; fb44c11; wu:fb38f07; wu:fb44c11; zgc:154061
Summary: Predicted to be involved in erythrocyte differentiation. Predicted to be active in cytoplasm and nucleus. Is expressed in female organism. Human ortholog(s) of this gene implicated in congenital dyserythropoietic anemia type Ib. Orthologous to human CDIN1 (CDAN1 interacting nuclease 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (52940551..53022431, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (52854307..52933996, complement)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G45464 (e-PCR)
- UniSTS:106266

G39892 (e-PCR)
- UniSTS:18466

G40052 (e-PCR)
- UniSTS:31012

fb44c11 (e-PCR)
- UniSTS:187212

fb38f07.x1 (e-PCR)
- UniSTS:203176

fb44c11.x1 (e-PCR)
- UniSTS:203212

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in erythrocyte differentiation	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	ISS Inferred from Sequence or Structural Similarity more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: CDAN1-interacting nuclease 1

Names: protein C15orf41 homolog; uncharacterized protein C15orf41 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.