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    si:ch211-125e6.12 si:ch211-125e6.12 [ Danio rerio (zebrafish) ]

    Gene ID: 100126100, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:ch211-125e6.12provided by ZNC
    Official Full Name
    si:ch211-125e6.12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-36
    See related
    Ensembl:ENSDARG00000092090 AllianceGenome:ZFIN:ZDB-GENE-070912-36
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable signaling receptor activity. Orthologous to human REG3G (regenerating family member 3 gamma) and REG4 (regenerating family member 4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See si:ch211-125e6.12 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (33216945..33218256)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (33406199..33407510)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene DOP1 leucine zipper like protein B Neighboring gene si:ch211-125e6.11 Neighboring gene si:ch211-125e6.13 Neighboring gene si:ch211-125e6.14

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC100126100

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109829.1NP_001103299.1  uncharacterized protein LOC100126100 precursor

      See identical proteins and their annotated locations for NP_001103299.1

      Status: PREDICTED

      Source sequence(s)
      BC153316
      UniProtKB/TrEMBL
      A0A8M1NEU5, A8E4S9
      Related
      ENSDARP00000121314.1, ENSDART00000134029.3
      Conserved Domains (1) summary
      cd00037
      Location:35146
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      33216945..33218256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)