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    grcc10 gene rich cluster, C10 gene [ Danio rerio (zebrafish) ]

    Gene ID: 323559, updated on 9-Dec-2024

    Summary

    Official Symbol
    grcc10provided by ZNC
    Official Full Name
    gene rich cluster, C10 geneprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-2279
    See related
    Ensembl:ENSDARG00000030038 AllianceGenome:ZFIN:ZDB-GENE-030131-2279
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc02g04; zgc:86838; wu:fc02g04
    Summary
    Predicted to be involved in post-embryonic development. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Temtamy syndrome. Orthologous to human C12orf57 (chromosome 12 open reading frame 57). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See grcc10 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (14458930..14462997, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (14562950..14567017, complement)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene disks large-associated protein 2-like Neighboring gene discs, large (Drosophila) homolog-associated protein 2b Neighboring gene si:dkey-69c1.1 Neighboring gene uncharacterized LOC137488724

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in post-embryonic development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein C10
    Names
    C10-like protein (GRCC10)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212646.2NP_997811.1  protein C10

      See identical proteins and their annotated locations for NP_997811.1

      Status: VALIDATED

      Source sequence(s)
      BX465225
      UniProtKB/Swiss-Prot
      Q6TH01
      Related
      ENSDARP00000044124.5, ENSDART00000044125.7
      Conserved Domains (1) summary
      pfam14974
      Location:1199
      P_C10; Protein C10

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      14458930..14462997 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)