slc25a11 solute carrier family 25 member 11 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc25a11provided by ZNC
Official Full Name: solute carrier family 25 member 11provided by ZNC
Primary source: ZFIN:ZDB-GENE-040625-79
See related: Ensembl:ENSDARG00000035741 AllianceGenome:ZFIN:ZDB-GENE-040625-79
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fa07h09; zgc:86898; wu:fa07h09
Summary: Predicted to enable C4-dicarboxylate transmembrane transporter activity; antiporter activity; and sulfur compound transmembrane transporter activity. Predicted to be involved in C4-dicarboxylate transport; inorganic anion transmembrane transport; and thiosulfate transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in paraganglioma. Orthologous to human SLC25A11 (solute carrier family 25 member 11). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (68076913..68093169, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (67397951..67414207, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: mitochondrial 2-oxoglutarate/malate carrier protein

Names: solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001002099.1 → NP_001002099.1 mitochondrial 2-oxoglutarate/malate carrier protein

See identical proteins and their annotated locations for NP_001002099.1

Status: PROVISIONAL

Source sequence(s)

BC071521

UniProtKB/TrEMBL

Q6IQ89

Related

ENSDARP00000051848.3, ENSDART00000051849.4

Conserved Domains (2) summary

PTZ00169
Location:19 → 300

PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional

pfam00153
Location:213 → 305

Mito_carr; Mitochondrial carrier protein