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    znf576.1 zinc finger protein 576, tandem duplicate 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100006440, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf576.1provided by ZNC
    Official Full Name
    zinc finger protein 576, tandem duplicate 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-131120-125
    See related
    Ensembl:ENSDARG00000097819 AllianceGenome:ZFIN:ZDB-GENE-131120-125
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch211-261d7.4
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF576 (zinc finger protein 576). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See znf576.1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (25137457..25163213)

    Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene zgc:92590 Neighboring gene trypsin-2-like Neighboring gene zinc finger protein 576, tandem duplicate 2 Neighboring gene wu:fe05a04

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007127.7 Chromosome 16 Reference GRCz11 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    zinc finger protein 576, tandem duplicate 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001423206.1 → NP_001410135.1  zinc finger protein 576, tandem duplicate 1

      Status: VALIDATED

      Source sequence(s)
      CU062628
      UniProtKB/TrEMBL
      A0A8M6Z1T1
      Related
      ENSDARP00000128300.1, ENSDART00000155666.3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007127.7 Reference GRCz11 Primary Assembly

      Range
      25137457..25163213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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