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    matcap2 microtubule associated tyrosine carboxypeptidase 2 [ Danio rerio (zebrafish) ]

    Gene ID: 568013, updated on 9-Dec-2024

    Summary

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    Official Symbol
    matcap2provided by ZNC
    Official Full Name
    microtubule associated tyrosine carboxypeptidase 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-438
    See related
    Ensembl:ENSDARG00000057227 AllianceGenome:ZFIN:ZDB-GENE-060503-438
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    kiaa0895; si:dkey-222b8.4
    Summary
    Predicted to enable hydrolase activity. Orthologous to human MATCAP2 (microtubule associated tyrosine carboxypeptidase 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See matcap2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (23876533..23895156, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (24291789..24310954, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase pim-2-like Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 92 Neighboring gene chromatin target of PRMT1a Neighboring gene SNAP associated protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Expressed sequence tag analysis of expression profiles of zebrafish testis and ovary. Zeng S, et al. Gene, 2002 Jul 10. PMID 12234666
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein KIAA0895; putative tyrosine carboxypeptidase MATCAP2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      23876533..23895156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_691325.9 → XP_696417.4  putative tyrosine carboxypeptidase MATCAP2 isoform X1

      UniProtKB/TrEMBL
      A0A286Y841, A0A8N7TFB3
      Related
      ENSDARP00000143305.1, ENSDART00000174834.2
      Conserved Domains (1) summary
      cl06858
      Location:220 → 484
      DUF1704; Domain of unknown function (DUF1704)

    2. XM_068215277.1 → XP_068071378.1  putative tyrosine carboxypeptidase MATCAP2 isoform X2

      UniProtKB/TrEMBL
      A0A8M3B3J8
      Related
      ENSDARP00000113483.1, ENSDART00000132384.2

    3. XM_009294261.4 → XP_009292536.1  putative tyrosine carboxypeptidase MATCAP2 isoform X3

      UniProtKB/TrEMBL
      A0A8M3AK87
      Conserved Domains (1) summary
      cl06858
      Location:214 → 478
      DUF1704; Domain of unknown function (DUF1704)
    Nucleotide Protein Strain
    Heading Accession and Version

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