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    defbl1 defensin, beta-like 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100009619, updated on 9-Dec-2024

    Summary

    Official Symbol
    defbl1provided by ZNC
    Official Full Name
    defensin, beta-like 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070207-1
    See related
    Ensembl:ENSDARG00000075161 AllianceGenome:ZFIN:ZDB-GENE-070207-1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    db-1
    Summary
    Predicted to act upstream of or within innate immune response. Predicted to be located in extracellular region. Is expressed in digestive system; gill; integument; muscle cell; and pleuroperitoneal region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See defbl1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (21741804..21742838)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (21705168..21706202)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene odorant receptor, family E, subfamily 124, member 5, pseudogene Neighboring gene odorant receptor, family 61, subfamily C, member 3 Neighboring gene polymerase (DNA-directed), delta 3, accessory subunit Neighboring gene chordin-like 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    beta-defensin-like 1
    Names
    BD-1
    defensin-like protein 1
    zfdb-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081553.1NP_001075022.1  beta-defensin-like 1 precursor

      See identical proteins and their annotated locations for NP_001075022.1

      Status: PROVISIONAL

      Source sequence(s)
      AM181358
      UniProtKB/TrEMBL
      A1IVM9
      Related
      ENSDARP00000104248.3, ENSDART00000112068.4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      21741804..21742838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)