ropn1l rhophilin associated tail protein 1-like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ropn1lprovided by ZNC
Official Full Name: rhophilin associated tail protein 1-likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040724-235
See related: Ensembl:ENSDARG00000058370 AllianceGenome:ZFIN:ZDB-GENE-040724-235
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: asp; bZ1F1.7; zgc:101773; si:rp71-1f1.7
Summary: Acts upstream of or within spermatid development. Predicted to be located in motile cilium. Predicted to be part of radial spoke. Is expressed in testis. Orthologous to human ROPN1L (rhophilin associated tail protein 1 like). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (22021678..22030868)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (21876504..21885694)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within spermatid development	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in cell projection	IEA Inferred from Electronic Annotation more info
located_in cilium	IEA Inferred from Electronic Annotation more info
located_in motile cilium	IEA Inferred from Electronic Annotation more info
part_of radial spoke	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: ropporin-1-like protein

Names: A-kinase anchoring protein-associated sperm protein; AKAP-associated sperm protein; ropporin 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001004624.1 → NP_001004624.1 ropporin-1-like protein

See identical proteins and their annotated locations for NP_001004624.1

Status: PROVISIONAL

Source sequence(s)

BC081402

UniProtKB/Swiss-Prot

Q66IC9, Q7T169

UniProtKB/TrEMBL

B2GR96

Related

ENSDARP00000075677.4, ENSDART00000081234.6

Conserved Domains (1) summary

cl02594
Location:15 → 51

DD_R_PKA; Dimerization/Docking domain of the Regulatory subunit of cAMP-dependent protein kinase and similar domains