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    eif1axa eukaryotic translation initiation factor 1A X-linked a [ Danio rerio (zebrafish) ]

    Gene ID: 450062, updated on 9-Dec-2024

    Summary

    Official Symbol
    eif1axaprovided by ZNC
    Official Full Name
    eukaryotic translation initiation factor 1A X-linked aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-185
    See related
    Ensembl:ENSDARG00000029003 AllianceGenome:ZFIN:ZDB-GENE-041010-185
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    eif1ax; zgc:101670
    Summary
    Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to act upstream of or within translation. Predicted to be active in cytoplasm. Orthologous to several human genes including EIF1AX (eukaryotic translation initiation factor 1A X-linked). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See eif1axa in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (24002598..24009104, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (23498798..23505304, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene chromo domain-containing protein cec-1-like Neighboring gene MAP7 domain containing 2a Neighboring gene ribosomal protein S6 kinase a, polypeptide 3a Neighboring gene pyruvate dehydrogenase E1 subunit alpha 1a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables translation initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within translation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translational initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within translational initiation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 1A X-linked a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006082.2NP_001006082.1  eukaryotic translation initiation factor 1A X-linked a

      See identical proteins and their annotated locations for NP_001006082.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083238
      UniProtKB/TrEMBL
      B2GP65, Q5XJR0
      Related
      ENSDARP00000066644.4, ENSDART00000066645.5
      Conserved Domains (1) summary
      PTZ00329
      Location:1144
      PTZ00329; eukaryotic translation initiation factor 1A; Provisional

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      24002598..24009104 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394575.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      8329..14835 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)