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    mepceb methylphosphate capping enzyme b [ Danio rerio (zebrafish) ]

    Gene ID: 100151157, updated on 9-Dec-2024

    Summary

    Official Symbol
    mepcebprovided by ZNC
    Official Full Name
    methylphosphate capping enzyme bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-110411-13
    See related
    Ensembl:ENSDARG00000035771 AllianceGenome:ZFIN:ZDB-GENE-110411-13
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:ch1073-157b13.1
    Summary
    Predicted to enable O-methyltransferase activity; RNA methyltransferase activity; and snRNA binding activity. Predicted to be involved in snRNA modification. Predicted to act upstream of or within methylation. Orthologous to human MEPCE (methylphosphate capping enzyme). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See mepceb in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (44236291..44251006)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (44470230..44485082)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene coronin 2Ab Neighboring gene zgc:158659 Neighboring gene discs, large homolog 4b (Drosophila) Neighboring gene eph receptor B4b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables O-methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA methyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables snRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within methylation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in snRNA modification IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    7SK snRNA methylphosphate capping enzyme-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      44236291..44251006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001921694.6XP_001921729.2  7SK snRNA methylphosphate capping enzyme-like

      UniProtKB/TrEMBL
      A0A8M1QV31, F1R4M0
      Related
      ENSDARP00000123928.1, ENSDART00000149842.3
      Conserved Domains (2) summary
      pfam06859
      Location:515622
      Bin3; Bicoid-interacting protein 3 (Bin3)
      pfam12847
      Location:384557
      Methyltransf_18; Methyltransferase domain