c1qc complement component 1, q subcomponent, C chain [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: c1qcprovided by ZNC
Official Full Name: complement component 1, q subcomponent, C chainprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-51
See related: Ensembl:ENSDARG00000095627 AllianceGenome:ZFIN:ZDB-GENE-041010-51
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:103597
Summary: Acts upstream of or within complement activation, classical pathway. Predicted to be located in extracellular region. Is expressed in several structures, including eye; heart; integument; liver; and pleuroperitoneal region. Orthologous to several human genes including C1QC (complement C1q C chain). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 21

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (22717824..22720359, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (22681219..22683754, complement)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within complement activation, classical pathway	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: complement C1q subcomponent subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001005976.2 → NP_001005976.2 complement C1q subcomponent subunit C precursor

Status: VALIDATED

Source sequence(s)

BX510940

UniProtKB/TrEMBL

Q5XJ71

Related

ENSDARP00000104915.2, ENSDART00000130789.3