faub FAU ubiquitin like and ribosomal protein S30 fusion b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: faubprovided by ZNC
Official Full Name: FAU ubiquitin like and ribosomal protein S30 fusion bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-050417-416
See related: Ensembl:ENSDARG00000043663 AllianceGenome:ZFIN:ZDB-GENE-050417-416
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:7142593; zgc:110695
Summary: Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in cytosol and ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human FAU (FAU ubiquitin like and ribosomal protein S30 fusion). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (26990093..26991834)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (27028380..27030121)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fj41f12.y1 (e-PCR)
- UniSTS:199316

fa20c09.s1 (e-PCR)
- UniSTS:189601

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytosol	IEA Inferred from Electronic Annotation more info
part_of cytosolic small ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: FAU ubiquitin like and ribosomal protein S30 fusion b

Names: Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001017866.2 → NP_001017866.2 FAU ubiquitin like and ribosomal protein S30 fusion b

Status: VALIDATED

Source sequence(s)

EH544900, EH553277, EH570638

UniProtKB/TrEMBL

A0A8M1N5J0, F1RA98

Related

ENSDARP00000064110.5, ENSDART00000064111.6

Conserved Domains (3) summary

cd01793
Location:1 → 74

Fubi; Fubi ubiquitin-like protein

smart00213
Location:1 → 67

UBQ; Ubiquitin homologues

pfam04758
Location:75 → 132

Ribosomal_S30; Ribosomal protein S30