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    fam110b family with sequence similarity 110 member B [ Danio rerio (zebrafish) ]

    Gene ID: 573995, updated on 9-Dec-2024

    Summary

    Official Symbol
    fam110bprovided by ZNC
    Official Full Name
    family with sequence similarity 110 member Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050626-70
    See related
    Ensembl:ENSDARG00000088073 AllianceGenome:ZFIN:ZDB-GENE-050626-70
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fk89a03; wu:fk89a03; zgc:114139; si:dkey-43b14.3
    Summary
    Predicted to be located in centrosome and cytoplasm. Is expressed in brain and epiphysis. Orthologous to human FAM110B (family with sequence similarity 110 member B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See fam110b in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (22208404..22286828, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (22548442..22631177, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137487812 Neighboring gene thymocyte selection-associated high mobility group box Neighboring gene cytochrome P450, family 7, subfamily A, polypeptide 1 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 65 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 66

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025174.1NP_001020345.1  protein FAM110B

      See identical proteins and their annotated locations for NP_001020345.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097194
      UniProtKB/Swiss-Prot
      Q4QRD7
      Related
      ENSDARP00000138309.1, ENSDART00000168653.2
      Conserved Domains (2) summary
      pfam14160
      Location:279388
      FAM110_C; Centrosome-associated C terminus
      pfam14161
      Location:11121
      FAM110_N; Centrosome-associated N terminus

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      22208404..22286828 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017358945.3XP_017214434.1  protein FAM110B isoform X1

      UniProtKB/TrEMBL
      A0A8M6Z9R5, F1R180
    2. XM_017358941.3XP_017214430.1  protein FAM110B isoform X1

      UniProtKB/TrEMBL
      A0A8M6Z9R5, F1R180