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    CHURC1 churchill domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 616539, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CHURC1provided by VGNC
    Official Full Name
    churchill domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:27355
    See related
    BGD:BT21420; Ensembl:ENSBTAG00000003469
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
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    Genomic context

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    See CHURC1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (77048110..77066488)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene pleckstrin homology and RhoGEF domain containing G3 Neighboring gene spectrin beta, erythrocytic Neighboring gene uncharacterized LOC112448512 Neighboring gene glutathione peroxidase 2 Neighboring gene RAB15, member RAS oncogene family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128554

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Churchill

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046581.2 → NP_001040046.1  protein Churchill

      See identical proteins and their annotated locations for NP_001040046.1

      Status: PROVISIONAL

      Source sequence(s)
      BC105418
      UniProtKB/Swiss-Prot
      Q2HJG7
      Conserved Domains (1) summary
      pfam06573
      Location:1 → 111
      Churchill; Churchill protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      77048110..77066488
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005212045.5 → XP_005212102.2  protein Churchill isoform X3

      Related
      ENSBTAP00000035640.5, ENSBTAT00000035771.5

    2. XM_059890653.1 → XP_059746636.1  protein Churchill isoform X4

      UniProtKB/TrEMBL
      A0AAA9T805

    3. XM_024997830.2 → XP_024853598.2  protein Churchill isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LZJ7

    4. XM_024997831.2 → XP_024853599.2  protein Churchill isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LZJ7
      Related
      ENSBTAP00000062757.1, ENSBTAT00000071144.2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2HJG7.3 GenPept UniProtKB/Swiss-Prot:Q2HJG7

    Gene LinkOut

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