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    ZNF609 zinc finger protein 609 [ Bos taurus (domestic cattle) ]

    Gene ID: 510374, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ZNF609provided by VGNC
    Official Full Name
    zinc finger protein 609provided by VGNC
    Primary source
    VGNC:VGNC:37312
    See related
    BGD:BT26661; Ensembl:ENSBTAG00000015808
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF609 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (45380705..45582487, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346299 Neighboring gene PIF1 5'-to-3' DNA helicase Neighboring gene ornithine decarboxylase antizyme 2 Neighboring gene small nucleolar RNA SNORA19 Neighboring gene large ribosomal subunit protein eL22-like Neighboring gene ribulose-phosphate 3-epimerase-like Neighboring gene thyroid hormone receptor interactor 4 Neighboring gene uncharacterized LOC107132856 Neighboring gene PCNA clamp associated factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 609

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193023.3 → NP_001179952.1  zinc finger protein 609

      See identical proteins and their annotated locations for NP_001179952.1

      Status: VALIDATED

      Source sequence(s)
      GGVA01107248, NKLS02000010
      UniProtKB/TrEMBL
      E1B9Q8
      Related
      ENSBTAP00000020995.5, ENSBTAT00000020995.7
      Conserved Domains (2) summary
      PTZ00449
      Location:980 → 1226
      PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
      COG5189
      Location:412 → 533
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45380705..45582487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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