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    SRSF1 serine and arginine rich splicing factor 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 615796, updated on 30-Jan-2025

    Summary

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    Official Symbol
    SRSF1provided by VGNC
    Official Full Name
    serine and arginine rich splicing factor 1provided by VGNC
    Primary source
    VGNC:VGNC:35297
    See related
    EnsemblRapid:ENSBTAG00070006712
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SFRS1
    Orthologs
    human mouse all
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    Genomic context

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    See SRSF1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (8806072..8809826, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene CUE domain containing 1 Neighboring gene uncharacterized LOC132342996 Neighboring gene vascular endothelial zinc finger 1 Neighboring gene dynein light chain LC8-type 2 Neighboring gene olfactory receptor 4D1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139904

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 1
    Names
    splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)
    splicing factor, arginine/serine-rich 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076394.1 → NP_001069862.1  serine/arginine-rich splicing factor 1

      See identical proteins and their annotated locations for NP_001069862.1

      Status: PROVISIONAL

      Source sequence(s)
      BC119930
      UniProtKB/Swiss-Prot
      Q0VCY7
      Related
      ENSBTAP00070008722.1, ENSBTAT00070015288.1
      Conserved Domains (2) summary
      cd12597
      Location:12 → 90
      RRM1_SRSF1; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins
      cd12767
      Location:113 → 196
      RRM2_SRSF1; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 1 (SRSF1) and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      8806072..8809826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_238568.5 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VCY7.1 GenPept UniProtKB/Swiss-Prot:Q0VCY7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.