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    SNAP23 synaptosome associated protein 23 [ Bos taurus (domestic cattle) ]

    Gene ID: 522423, updated on 1-Jan-2025

    Summary

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    Official Symbol
    SNAP23provided by VGNC
    Official Full Name
    synaptosome associated protein 23provided by VGNC
    Primary source
    VGNC:VGNC:35050
    See related
    BGD:BT21817; Ensembl:ENSBTAG00000005661
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SNAP23 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (37826009..37866702)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene calpain 3 Neighboring gene zinc finger protein 106 Neighboring gene leucine rich repeat containing 57 Neighboring gene HAUS augmin like complex subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle priming IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptosomal-associated protein 23
    Names
    synaptosomal-associated protein, 23kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075831.1 → NP_001069299.1  synaptosomal-associated protein 23

      See identical proteins and their annotated locations for NP_001069299.1

      Status: PROVISIONAL

      Source sequence(s)
      BC111350
      UniProtKB/TrEMBL
      A0AAA9RZ22, F1N473, Q2T9M8
      Related
      ENSBTAP00000007438.5, ENSBTAT00000007438.6
      Conserved Domains (3) summary
      cd15884
      Location:149 → 207
      SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
      cd15895
      Location:9 → 75
      SNARE_SNAP23N; N-terminal SNARE motif of SNAP23
      pfam00835
      Location:86 → 147
      SNAP-25; SNAP-25 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37826009..37866702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890427.1 → XP_059746410.1  synaptosomal-associated protein 23 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RZ22

    2. XM_005211573.5 → XP_005211630.1  synaptosomal-associated protein 23 isoform X2

      See identical proteins and their annotated locations for XP_005211630.1

      UniProtKB/TrEMBL
      A0AAA9RZ22, F1N473, Q2T9M8
      Conserved Domains (3) summary
      cd15884
      Location:149 → 207
      SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
      cd15895
      Location:9 → 75
      SNARE_SNAP23N; N-terminal SNARE motif of SNAP23
      pfam00835
      Location:86 → 147
      SNAP-25; SNAP-25 family

    3. XM_059890428.1 → XP_059746411.1  synaptosomal-associated protein 23 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RZ22

    4. XM_024997563.2 → XP_024853331.1  synaptosomal-associated protein 23 isoform X2

      UniProtKB/TrEMBL
      A0AAA9RZ22, F1N473, Q2T9M8
      Conserved Domains (3) summary
      cd15884
      Location:149 → 207
      SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
      cd15895
      Location:9 → 75
      SNARE_SNAP23N; N-terminal SNARE motif of SNAP23
      pfam00835
      Location:86 → 147
      SNAP-25; SNAP-25 family

    5. XM_059890426.1 → XP_059746409.1  synaptosomal-associated protein 23 isoform X1

      UniProtKB/TrEMBL
      A0AAA9RZ22
    Nucleotide Protein Strain
    Heading Accession and Version

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