U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MTSS1 MTSS I-BAR domain containing 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 523498, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    MTSS1provided by VGNC
    Official Full Name
    MTSS I-BAR domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:31752
    See related
    BGD:BT24868; EnsemblRapid:ENSBTAG00070017039
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MTSS1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (15392096..15553664)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 572 Neighboring gene uncharacterized LOC132342187 Neighboring gene mitochondrial import inner membrane translocase subunit Tim8 A-like Neighboring gene NADH:ubiquinone oxidoreductase subunit B9 Neighboring gene TatD DNase domain containing 1 Neighboring gene ring finger protein 139

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adherens junction maintenance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in plasma membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein MTSS 1
    Names
    MTSS1, I-BAR domain containing

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192581.2 → NP_001179510.1  protein MTSS 1

      See identical proteins and their annotated locations for NP_001179510.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000014
      UniProtKB/TrEMBL
      A0A3Q1LLN6
      Conserved Domains (1) summary
      cd07643
      Location:7 → 237
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      15392096..15553664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059893260.1 → XP_059749243.1  protein MTSS 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LLN6

    2. XM_025001583.2 → XP_024857351.1  protein MTSS 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LLN6, E1BP52
      Related
      ENSBTAP00070022638.1, ENSBTAT00070038338.1
      Conserved Domains (2) summary
      cd07643
      Location:7 → 241
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
      cl28033
      Location:582 → 744
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    3. XM_005215374.5 → XP_005215431.1  protein MTSS 1 isoform X8

      UniProtKB/TrEMBL
      A0A3Q1LLN6, A0A3Q1MNC6
      Related
      ENSBTAP00070022628.1, ENSBTAT00070038328.1
      Conserved Domains (1) summary
      cd07643
      Location:7 → 241
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis

    4. XM_059893261.1 → XP_059749244.1  protein MTSS 1 isoform X5

      UniProtKB/TrEMBL
      A0A3Q1LLN6

    5. XM_005215372.5 → XP_005215429.1  protein MTSS 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LLN6
      Conserved Domains (1) summary
      cd07643
      Location:7 → 241
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis

    6. XM_005215373.5 → XP_005215430.1  protein MTSS 1 isoform X6

      See identical proteins and their annotated locations for XP_005215430.1

      UniProtKB/TrEMBL
      A0A3Q1LLN6
      Related
      ENSBTAP00070022636.1, ENSBTAT00070038336.1
      Conserved Domains (1) summary
      cd07643
      Location:7 → 237
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis

    7. XM_025001584.2 → XP_024857352.1  protein MTSS 1 isoform X9

      UniProtKB/TrEMBL
      A0A3Q1LL14, A0A3Q1LLN6
      Related
      ENSBTAP00070022634.1, ENSBTAT00070038334.1
      Conserved Domains (3) summary
      cd07643
      Location:7 → 237
      I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
      pfam02205
      Location:664 → 688
      WH2; WH2 motif
      cl28033
      Location:513 → 675
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

    8. XM_059893262.1 → XP_059749245.1  protein MTSS 1 isoform X7

      UniProtKB/TrEMBL
      A0A3Q1LLN6

    9. XM_059893259.1 → XP_059749242.1  protein MTSS 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LLN6

    10. XM_059893263.1 → XP_059749246.1  protein MTSS 1 isoform X10

      UniProtKB/TrEMBL
      A0A3Q1LLN6

    11. XM_059893264.1 → XP_059749247.1  protein MTSS 1 isoform X11

      UniProtKB/TrEMBL
      A0A3Q1LLN6
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials