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    ATL1 atlastin GTPase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 535424, updated on 1-Feb-2025

    Summary

    Official Symbol
    ATL1provided by VGNC
    Official Full Name
    atlastin GTPase 1provided by VGNC
    Primary source
    VGNC:VGNC:26265
    See related
    BGD:BT12527; EnsemblRapid:ENSBTAG00070011913
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SPG3A; atlastin
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See ATL1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (43448706..43522956)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene distal membrane arm assembly component 2 like Neighboring gene cyclin dependent kinase like 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 5 Neighboring gene proline-rich proteoglycan 2-like Neighboring gene salvador family WW domain containing protein 1 Neighboring gene ninein

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    atlastin-1
    Names
    spastic paraplegia 3A (autosomal dominant)
    NP_001029803.1
    XP_059746498.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034631.2NP_001029803.1  atlastin-1

      See identical proteins and their annotated locations for NP_001029803.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103448
      UniProtKB/Swiss-Prot
      Q3ZBC1, Q58D72
      UniProtKB/TrEMBL
      A0A3Q1NG58
      Related
      ENSBTAP00070016043.1, ENSBTAT00070026935.1
      Conserved Domains (1) summary
      pfam02263
      Location:43314
      GBP; Guanylate-binding protein, N-terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43448706..43522956
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890515.1XP_059746498.1  atlastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NG58, A0AAA9SP82
      Related
      ENSBTAP00070016048.1, ENSBTAT00070026940.1