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    PPP1R3B protein phosphatase 1 regulatory subunit 3B [ Bos taurus (domestic cattle) ]

    Gene ID: 514428, updated on 27-Dec-2024

    Summary

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    Official Symbol
    PPP1R3Bprovided by VGNC
    Official Full Name
    protein phosphatase 1 regulatory subunit 3Bprovided by VGNC
    Primary source
    VGNC:VGNC:33243
    See related
    BGD:BT16717; Ensembl:ENSBTAG00000010606
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R3B in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (25178168..25190244, complement)

    Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene exoribonuclease 1 Neighboring gene uncharacterized LOC104976076 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132344056

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC139088

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycogen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of glycogen catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of protein phosphatase type 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 3B
    Names
    protein phosphatase 1, regulatory (inhibitor) subunit 3B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103247.1 → NP_001096717.1  protein phosphatase 1 regulatory subunit 3B

      See identical proteins and their annotated locations for NP_001096717.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148936
      UniProtKB/Swiss-Prot
      A6QNP3
      Related
      ENSBTAP00000092803.1, ENSBTAT00000128111.1
      Conserved Domains (1) summary
      pfam03370
      Location:126 → 231
      CBM_21; Carbohydrate/starch-binding module (family 21)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25178168..25190244 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882217.1 → XP_059738200.1  protein phosphatase 1 regulatory subunit 3B isoform X2

      UniProtKB/Swiss-Prot
      A6QNP3
      Related
      ENSBTAP00000058425.1, ENSBTAT00000070313.2

    2. XM_024986252.2 → XP_024842020.1  protein phosphatase 1 regulatory subunit 3B isoform X1

      Conserved Domains (1) summary
      pfam03370
      Location:181 → 286
      CBM_21; Carbohydrate/starch-binding module (family 21)

    3. XM_059882218.1 → XP_059738201.1  protein phosphatase 1 regulatory subunit 3B isoform X2

      UniProtKB/Swiss-Prot
      A6QNP3
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QNP3.1 GenPept UniProtKB/Swiss-Prot:A6QNP3

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