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    IQCA1 IQ motif containing with AAA domain 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 618101, updated on 27-Dec-2024

    Summary

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    Official Symbol
    IQCA1provided by VGNC
    Official Full Name
    IQ motif containing with AAA domain 1provided by VGNC
    Primary source
    VGNC:VGNC:30248
    See related
    BGD:BT21098; Ensembl:ENSBTAG00000013505
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    IQCA
    Orthologs
    human mouse all
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    Genomic context

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    See IQCA1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (115779091..115967665, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 18 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene atypical chemokine receptor 3 Neighboring gene histone-lysine N-methyltransferase SETMAR-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dynein regulatory complex protein 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206547.1 → NP_001193476.1  dynein regulatory complex protein 11

      See identical proteins and their annotated locations for NP_001193476.1

      Status: VALIDATED

      Source sequence(s)
      EE250424, EE346641, EV706046, NKLS02000003
      UniProtKB/TrEMBL
      A0AAA9SWC5
      Conserved Domains (2) summary
      COG0464
      Location:488 → 788
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:571 → 686
      AAA; ATPase family associated with various cellular activities (AAA)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      115779091..115967665 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010803867.4 → XP_010802169.1  dynein regulatory complex protein 11 isoform X3

      UniProtKB/TrEMBL
      A0AAA9SYW0
      Related
      ENSBTAP00000089464.1, ENSBTAT00000111535.1
      Conserved Domains (2) summary
      COG0464
      Location:449 → 749
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:532 → 647
      AAA; ATPase family associated with various cellular activities (AAA)

    2. XM_015467211.3 → XP_015322697.1  dynein regulatory complex protein 11 isoform X2

      UniProtKB/TrEMBL
      A0AAA9SWC5
      Conserved Domains (2) summary
      COG0464
      Location:462 → 762
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:545 → 660
      AAA; ATPase family associated with various cellular activities (AAA)

    3. XM_010803866.4 → XP_010802168.1  dynein regulatory complex protein 11 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SWC5, A0AAA9T044
      Related
      ENSBTAP00000089756.1, ENSBTAT00000088872.1
      Conserved Domains (2) summary
      COG0464
      Location:489 → 789
      SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
      pfam00004
      Location:572 → 687
      AAA; ATPase family associated with various cellular activities (AAA)
    Nucleotide Protein Strain
    Heading Accession and Version

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