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    ARHGAP29 Rho GTPase activating protein 29 [ Bos taurus (domestic cattle) ]

    Gene ID: 504657, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ARHGAP29provided by VGNC
    Official Full Name
    Rho GTPase activating protein 29provided by VGNC
    Primary source
    VGNC:VGNC:26087
    See related
    Ensembl:ENSBTAG00000004190
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ARHGAP29 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (49238312..49320813)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily D member 3 Neighboring gene uncharacterized LOC132344875 Neighboring gene uncharacterized LOC132344874 Neighboring gene ATP binding cassette subfamily A member 4 Neighboring gene poly(rC)-binding protein 1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC166097

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rho GTPase-activating protein 29
    Names
    rho-type GTPase-activating protein 29

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102485.1 → NP_001095955.1  rho GTPase-activating protein 29

      See identical proteins and their annotated locations for NP_001095955.1

      Status: PROVISIONAL

      Source sequence(s)
      BC151351
      UniProtKB/Swiss-Prot
      A7YY57
      UniProtKB/TrEMBL
      A0A3Q1LQ27
      Related
      ENSBTAP00000072902.1, ENSBTAT00000071906.2
      Conserved Domains (3) summary
      smart00109
      Location:612 → 657
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cl02570
      Location:669 → 881
      RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
      cl12013
      Location:220 → 439
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49238312..49320813
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010803297.4 → XP_010801599.1  rho GTPase-activating protein 29 isoform X1

      See identical proteins and their annotated locations for XP_010801599.1

      UniProtKB/Swiss-Prot
      A7YY57
      UniProtKB/TrEMBL
      A0A3Q1LQ27
      Conserved Domains (3) summary
      smart00109
      Location:612 → 657
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cl02570
      Location:669 → 881
      RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
      cl12013
      Location:220 → 439
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_024985771.2 → XP_024841539.1  rho GTPase-activating protein 29 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LQ27, A0AAF6YLU2
      Related
      ENSBTAP00000005488.6, ENSBTAT00000005488.7
      Conserved Domains (4) summary
      smart00109
      Location:567 → 612
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cl02570
      Location:624 → 836
      RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
      cl12013
      Location:175 → 394
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      cl26464
      Location:1081 → 1212
      Atrophin-1; Atrophin-1 family

    3. XM_005204266.4 → XP_005204323.1  rho GTPase-activating protein 29 isoform X1

      See identical proteins and their annotated locations for XP_005204323.1

      UniProtKB/Swiss-Prot
      A7YY57
      UniProtKB/TrEMBL
      A0A3Q1LQ27
      Conserved Domains (3) summary
      smart00109
      Location:612 → 657
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cl02570
      Location:669 → 881
      RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
      cl12013
      Location:220 → 439
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A7YY57.1 GenPept UniProtKB/Swiss-Prot:A7YY57

    Gene LinkOut

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