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    DIDO1 death inducer-obliterator 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 519826, updated on 1-Jan-2025

    Summary

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    Official Symbol
    DIDO1provided by VGNC
    Official Full Name
    death inducer-obliterator 1provided by VGNC
    Primary source
    VGNC:VGNC:28064
    See related
    Ensembl:ENSBTAG00000006002
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See DIDO1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (54471038..54521932)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e23 Neighboring gene solute carrier family 17 member 9 Neighboring gene GID complex subunit 8 homolog Neighboring gene transcription factor like 5 Neighboring gene collagen type IX alpha 3 chain Neighboring gene opioid growth factor receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137821

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in apoptotic signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    death-inducer obliterator 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      54471038..54521932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025001117.2 → XP_024856885.1  death-inducer obliterator 1 isoform X1

      Conserved Domains (7) summary
      smart00510
      Location:681 → 782
      TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
      cd15639
      Location:272 → 325
      PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
      pfam07744
      Location:1056 → 1206
      SPOC; SPOC domain
      cl01090
      Location:1476 → 1526
      SlyX
      cl25887
      Location:2095 → 2145
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl26267
      Location:166 → 328
      ING; Inhibitor of growth proteins N-terminal histone-binding
      cl26386
      Location:1561 → 1999
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    2. XM_025001116.2 → XP_024856884.1  death-inducer obliterator 1 isoform X1

      Conserved Domains (7) summary
      smart00510
      Location:681 → 782
      TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
      cd15639
      Location:272 → 325
      PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
      pfam07744
      Location:1056 → 1206
      SPOC; SPOC domain
      cl01090
      Location:1476 → 1526
      SlyX
      cl25887
      Location:2095 → 2145
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl26267
      Location:166 → 328
      ING; Inhibitor of growth proteins N-terminal histone-binding
      cl26386
      Location:1561 → 1999
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    3. XM_059892975.1 → XP_059748958.1  death-inducer obliterator 1 isoform X1

    4. XM_015474242.3 → XP_015329728.2  death-inducer obliterator 1 isoform X2

      UniProtKB/TrEMBL
      E1BCR2
      Related
      ENSBTAP00000007879.6, ENSBTAT00000007879.7
      Conserved Domains (7) summary
      smart00510
      Location:674 → 775
      TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
      cd15639
      Location:265 → 318
      PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
      pfam07744
      Location:1049 → 1199
      SPOC; SPOC domain
      cl01090
      Location:1469 → 1519
      SlyX
      cl25887
      Location:2088 → 2138
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl26267
      Location:159 → 321
      ING; Inhibitor of growth proteins N-terminal histone-binding
      cl26386
      Location:1554 → 1992
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    5. XM_010811602.4 → XP_010809904.2  death-inducer obliterator 1 isoform X1

      Conserved Domains (7) summary
      smart00510
      Location:681 → 782
      TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
      cd15639
      Location:272 → 325
      PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
      pfam07744
      Location:1056 → 1206
      SPOC; SPOC domain
      cl01090
      Location:1476 → 1526
      SlyX
      cl25887
      Location:2095 → 2145
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl26267
      Location:166 → 328
      ING; Inhibitor of growth proteins N-terminal histone-binding
      cl26386
      Location:1561 → 1999
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    6. XM_015474243.3 → XP_015329729.2  death-inducer obliterator 1 isoform X2

      UniProtKB/TrEMBL
      E1BCR2
      Conserved Domains (7) summary
      smart00510
      Location:674 → 775
      TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
      cd15639
      Location:265 → 318
      PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
      pfam07744
      Location:1049 → 1199
      SPOC; SPOC domain
      cl01090
      Location:1469 → 1519
      SlyX
      cl25887
      Location:2088 → 2138
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cl26267
      Location:159 → 321
      ING; Inhibitor of growth proteins N-terminal histone-binding
      cl26386
      Location:1554 → 1992
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    7. XM_059892977.1 → XP_059748960.1  death-inducer obliterator 1 isoform X1

    8. XM_059892976.1 → XP_059748959.1  death-inducer obliterator 1 isoform X1

    9. XM_059892978.1 → XP_059748961.1  death-inducer obliterator 1 isoform X1

    10. XM_059892979.1 → XP_059748962.1  death-inducer obliterator 1 isoform X2

      UniProtKB/TrEMBL
      E1BCR2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001075794.1: Suppressed sequence

      Description
      NM_001075794.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: DIDO1 (GeneID:11083).
    Nucleotide Protein Strain
    Heading Accession and Version

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