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    MAPRE2 microtubule associated protein RP/EB family member 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 510159, updated on 1-Jan-2025

    Summary

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    Official Symbol
    MAPRE2provided by VGNC
    Official Full Name
    microtubule associated protein RP/EB family member 2provided by VGNC
    Primary source
    VGNC:VGNC:31233
    See related
    BGD:BT28981; Ensembl:ENSBTAG00000007520
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MAPRE2 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 24 NC_037351.1 (21874959..22062175, complement)

    Chromosome 24 - NC_037351.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 397 Neighboring gene high mobility group protein B3-like Neighboring gene uncharacterized LOC112444208 Neighboring gene dystrobrevin alpha Neighboring gene uncharacterized LOC132343763

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Establishment of a high throughput EST sequencing system using poly(A) tail-removed cDNA libraries and determination of 36,000 bovine ESTs. Takasuga A, et al. Nucleic Acids Res, 2001 Nov 15. PMID 11713328, Free PMC Article
    2. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC127154

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule plus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein localization to microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of microtubule polymerization or depolymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle midzone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    microtubule-associated protein RP/EB family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034374.2 → NP_001029546.1  microtubule-associated protein RP/EB family member 2

      See identical proteins and their annotated locations for NP_001029546.1

      Status: VALIDATED

      Source sequence(s)
      AV591286, BI534653, CB536192, DN531803, DR114045, DV848567, DV850419, DY163084, EE244269, EE245050
      UniProtKB/Swiss-Prot
      Q3SZP2
      UniProtKB/TrEMBL
      A0AAF6YR37
      Related
      ENSBTAP00000083974.1, ENSBTAT00000091154.1
      Conserved Domains (3) summary
      pfam00307
      Location:58 → 142
      CH; Calponin homology (CH) domain
      pfam03271
      Location:261 → 298
      EB1; EB1-like C-terminal motif
      cl01709
      Location:116 → 173
      PBP2_NikA_DppA_OppA_like; The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037351.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      21874959..22062175 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059880787.1 → XP_059736770.1  microtubule-associated protein RP/EB family member 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TQA2
      Related
      ENSBTAP00000098582.1, ENSBTAT00000120720.1

    2. XM_024984216.2 → XP_024839984.1  microtubule-associated protein RP/EB family member 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TQA2
      Related
      ENSBTAP00000087520.1, ENSBTAT00000109199.1
      Conserved Domains (1) summary
      cl26556
      Location:16 → 237
      EB1; EB1-like C-terminal motif

    3. XM_024984217.2 → XP_024839985.1  microtubule-associated protein RP/EB family member 2 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TQA2
      Conserved Domains (1) summary
      cl26556
      Location:16 → 237
      EB1; EB1-like C-terminal motif

    4. XM_024984215.2 → XP_024839983.1  microtubule-associated protein RP/EB family member 2 isoform X1

      UniProtKB/TrEMBL
      A0AAA9SQ73, A0AAA9TSC5
      Related
      ENSBTAP00000099382.1, ENSBTAT00000110687.1
      Conserved Domains (1) summary
      cl26556
      Location:47 → 268
      EB1; EB1-like C-terminal motif
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3SZP2.1 GenPept UniProtKB/Swiss-Prot:Q3SZP2

    Gene LinkOut

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