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    GNS1/SUR4 membrane protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819824, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GNS1/SUR4 membrane protein family
    Primary source
    TAIR:AT3G06470
    Locus tag
    AT3G06470
    See related
    Araport:AT3G06470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F24P17.3; F24P17_3
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (1983731..1985330)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene HCO3- transporter family Neighboring gene ubiquitin family protein Neighboring gene GNS1/SUR4 membrane protein family Neighboring gene DEAD box RNA helicase family protein Neighboring gene pyruvate dehydrogenase kinase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Bax inhibitor-1 interacts with enzymes related to very-long-chain fatty acid synthesis. Nagano M, et al. J Plant Res, 2019 Jan. PMID 30604175
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_111522.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables fatty acid elongase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within very long-chain fatty acid biosynthetic process IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    colocalizes_with endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GNS1/SUR4 membrane protein family
    NP_187298.1
    • GNS1/SUR4 membrane protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GNS1/SUR4 membrane protein (InterPro:IPR002076); BEST Arabidopsis thaliana protein match is: GNS1/SUR4 membrane protein family (TAIR:AT3G06460.1); Has 2217 Blast hits to 2209 proteins in 254 species: Archae - 0; Bacteria - 0; Metazoa - 1418; Fungi - 362; Plants - 108; Viruses - 14; Other Eukaryotes - 315 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1983731..1985330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111522.3 → NP_187298.1  GNS1/SUR4 membrane protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187298.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VDJ8, A0A384LI84, Q9SQV0
      Conserved Domains (1) summary
      pfam01151
      Location:43 → 272
      ELO; GNS1/SUR4 family
    Nucleotide Protein
    Heading Accession and Version

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