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    SAG20 senescence associated gene 20 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 2745879, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAG20
    Official Full Name
    senescence associated gene 20
    Primary source
    TAIR:AT3G10985
    Locus tag
    AT3G10985
    See related
    Araport:AT3G10985
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA WOUND-INDUCED PROTEIN 12; ATWI-12; senescence associated gene 20; WI12; WOUND-INDUCED PROTEIN 12
    Summary
    A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.
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    Genomic context

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    See SAG20 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (3442237..3443680)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene PLAC8 family protein Neighboring gene LURP-one-like protein (DUF567) Neighboring gene F-box associated ubiquitination effector family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Early transcriptomic events in microdissected Arabidopsis nematode-induced giant cells. Barcala M, et al. Plant J, 2010 Feb. PMID 20003167
    2. Gene expression profiles of O3-treated Arabidopsis plants. Tosti N, et al. Plant Cell Environ, 2006 Sep. PMID 16913859
    3. Transcription analysis of arabidopsis membrane transporters and hormone pathways during developmental and induced leaf senescence. van der Graaff E, et al. Plant Physiol, 2006 Jun. PMID 16603661, Free PMC Article
    4. Altered gene expression in three plant species in response to treatment with Nep1, a fungal protein that causes necrosis. Keates SE, et al. Plant Physiol, 2003 Jul. PMID 12857840, Free PMC Article
    5. A comparison of the expression patterns of several senescence-associated genes in response to stress and hormone treatment. Weaver LM, et al. Plant Mol Biol, 1998 Jun. PMID 9617813

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_202550.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in leaf senescence IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to fungus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to molecule of fungal origin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to nematode IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to ozone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    senescence associated gene 20
    NP_974279.1
    • senescence associated gene 20 (SAG20); CONTAINS InterPro DOMAIN/s: Wound-induced protein, Wun1, subgroup (InterPro:IPR016533), Wound-induced protein, Wun1 (InterPro:IPR009798); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT5G01740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3442237..3443680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202550.2 → NP_974279.1  senescence associated gene 20 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974279.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q94AK6, Q9SRK9
      UniProtKB/TrEMBL
      A0A178V9X9, A0A5S9XAZ8
      Conserved Domains (1) summary
      pfam07107
      Location:1 → 110
      WI12; Wound-induced protein WI12
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94AK6.1

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