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    GroES-like zinc-binding alcohol dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820739, updated on 18-Sep-2024

    Summary

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    Official Full Name
    GroES-like zinc-binding alcohol dehydrogenase family protein
    Primary source
    TAIR:AT3G15090
    Locus tag
    AT3G15090
    See related
    Araport:AT3G15090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (5076624..5079159)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RAB GTPase homolog A1G Neighboring gene RING/U-box superfamily protein Neighboring gene Polynucleotidyl transferase, ribonuclease H-like superfamily protein Neighboring gene Serine/Threonine-kinase pakA-like protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_112371.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    GroES-like zinc-binding alcohol dehydrogenase family protein
    NP_188127.1
    • GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT1G23740.1); Has 32555 Blast hits to 32407 proteins in 2523 species: Archae - 489; Bacteria - 20756; Metazoa - 1208; Fungi - 3376; Plants - 855; Viruses - 0; Other Eukaryotes - 5871 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5076624..5079159
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112371.6 → NP_188127.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188127.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VH04, A0A384LEI3, Q8LBA4, Q9LK96
      Conserved Domains (1) summary
      cd05289
      Location:33 → 364
      MDR_like_2; alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases
    Nucleotide Protein
    Heading Accession and Version

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