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    Ola1 Obg-like ATPase 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 296488, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ola1provided by RGD
    Official Full Name
    Obg-like ATPase 1provided by RGD
    Primary source
    RGD:1307982
    See related
    EnsemblRapid:ENSRNOG00000019047 AllianceGenome:RGD:1307982
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    PTD004; RGD1307982
    Summary
    Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in ATP metabolic process. Predicted to be located in centrosome and cytosol. Predicted to be active in cytoplasm. Orthologous to human OLA1 (Obg like ATPase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Muscle (RPKM 333.9), Brain (RPKM 327.5) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Ola1 in Genome Data Viewer
    Location:
    3q23
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (78374440..78493401, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (57966896..58085955, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (59802007..59920935, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134486111 Neighboring gene uncharacterized LOC103691820 Neighboring gene uncharacterized LOC102546819 Neighboring gene tubulin-specific chaperone A-like Neighboring gene transfer RNA valine (anticodon AAC) 24 Neighboring gene 60S ribosomal protein L27-like Neighboring gene Sp9 transcription factor Neighboring gene corepressor interacting with RBPJ, 1

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC156509

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ribosomal large subunit binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ATP metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    obg-like ATPase 1
    Names
    GTP-binding protein PTD004
    NP_001029099.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033927.1NP_001029099.1  obg-like ATPase 1

      See identical proteins and their annotated locations for NP_001029099.1

      Status: VALIDATED

      Source sequence(s)
      BG664368, CB608471, CB782771, CK478110, CK845210, CV119424, CV797114
      UniProtKB/Swiss-Prot
      A0JPJ7
      UniProtKB/TrEMBL
      A6HM82
      Related
      ENSRNOP00000026040.4, ENSRNOT00000026040.7
      Conserved Domains (3) summary
      cd01900
      Location:25303
      YchF; YchF GTPase
      PTZ00258
      Location:1390
      PTZ00258; GTP-binding protein; Provisional
      pfam06071
      Location:305388
      YchF-GTPase_C; Protein of unknown function (DUF933)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      78374440..78493401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)