fam162a family with sequence similarity 162 member A [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: fam162aprovided by ZNC
Official Full Name: family with sequence similarity 162 member Aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-8307
See related: Ensembl:ENSDARG00000063344 AllianceGenome:ZFIN:ZDB-GENE-030131-8307
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fam162b; fb08c12; wu:fb08c12; zgc:162943
Summary: Predicted to be involved in cellular response to hypoxia; neuron apoptotic process; and positive regulation of release of cytochrome c from mitochondria. Predicted to be located in membrane. Predicted to be active in mitochondrion. Orthologous to human FAM162A (family with sequence similarity 162 member A). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (20927202..20934666)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (20782716..20790247)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb08c12.x1 (e-PCR)
- UniSTS:202753

fj51e05.y1 (e-PCR)
- UniSTS:199498

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in cellular response to hypoxia	IBA Inferred from Biological aspect of Ancestor more info
involved_in neuron apoptotic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in positive regulation of release of cytochrome c from mitochondria	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in mitochondrion	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: protein FAM162B

Names: UPF0389 protein FAM162B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.