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    tacc2 transforming, acidic coiled-coil containing protein 2 [ Danio rerio (zebrafish) ]

    Gene ID: 569976, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tacc2provided by ZNC
    Official Full Name
    transforming, acidic coiled-coil containing protein 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-9748
    See related
    AllianceGenome:ZFIN:ZDB-GENE-030131-9748
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    cb259; fj19d06; sb:cb259; wu:fj19d06
    Summary
    Predicted to act upstream of or within mitotic spindle organization. Predicted to be located in cytoplasm and cytoskeleton. Is expressed in several structures, including anterior neural keel; axial chorda mesoderm; nervous system; tail bud; and trigeminal placode. Orthologous to human TACC2 (transforming acidic coiled-coil containing protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See tacc2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (28808000..28902298)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (28672471..28771846)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene NSE4 homolog A, SMC5-SMC6 complex component Neighboring gene HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 Neighboring gene lymphocyte antigen 6 family member pge Neighboring gene unc-5 netrin receptor B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Spatiotemporal resolution of the Ntla transcriptome in axial mesoderm development. Shestopalov IA, et al. Nat Chem Biol, 2012 Jan 29. PMID 22286130, Free PMC Article
    2. Identification of direct T-box target genes in the developing zebrafish mesoderm. Garnett AT, et al. Development, 2009 Mar. PMID 19158186, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    microtubule-associated protein futsch; transforming, acidic coiled-coil containing protein 2
    Names
    transforming acidic coiled-coil-containing protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      28808000..28902298
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068213069.1 → XP_068069170.1  microtubule-associated protein futsch isoform X1

      UniProtKB/TrEMBL
      A0A8M9QNU6

    2. XM_068213070.1 → XP_068069171.1  microtubule-associated protein futsch isoform X2

      UniProtKB/TrEMBL
      A0A8M9PYP1
    Nucleotide Protein
    Heading Accession and Version

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