slc5a6b solute carrier family 5 member 6 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: slc5a6bprovided by ZNC
Official Full Name: solute carrier family 5 member 6provided by ZNC
Primary source: ZFIN:ZDB-GENE-050913-86
See related: Ensembl:ENSDARG00000014599 AllianceGenome:ZFIN:ZDB-GENE-050913-86
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: slc5a6; wu:fa19f06; zgc:114067
Summary: Predicted to enable sodium-dependent multivitamin transmembrane transporter activity. Predicted to be involved in biotin transport; pantothenate transmembrane transport; and sodium ion transport. Predicted to act upstream of or within monoatomic ion transport and transmembrane transport. Predicted to be located in plasma membrane. Orthologous to human SLC5A6 (solute carrier family 5 member 6). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 17

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	17	NC_007128.7 (6535924..6556143)
105	previous assembly	GRCz10 (GCF_000002035.5)	17	NC_007128.6 (6378754..6398913)

Chromosome 17 - NC_007128.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables sodium-dependent multivitamin transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in biotin transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within monoatomic ion transport	IEA Inferred from Electronic Annotation more info
involved_in pantothenate transmembrane transport	IBA Inferred from Biological aspect of Ancestor more info
involved_in sodium ion transport	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within sodium ion transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within transmembrane transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: solute carrier family 5 member 6

Names: solute carrier family 5 (sodium-dependent vitamin transporter), member 6; solute carrier family 5 (sodium-dependent vitamin transporter), member 6b; solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.