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    adipor1b adiponectin receptor 1b [ Danio rerio (zebrafish) ]

    Gene ID: 406821, updated on 9-Dec-2024

    Summary

    Official Symbol
    adipor1bprovided by ZNC
    Official Full Name
    adiponectin receptor 1bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2896
    See related
    Ensembl:ENSDARG00000042717 AllianceGenome:ZFIN:ZDB-GENE-040426-2896
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    adipor1; zgc:55386; wu:fj02d08
    Summary
    Predicted to enable signaling receptor activity. Acts upstream of or within retinal rod cell development. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including EVL; brain; fat cell; head; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    See adipor1b in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (28358161..28365548)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (28362309..28374324)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene tubulin alpha 5 Neighboring gene kelch-like protein 12 Neighboring gene kelch-like family member 12 Neighboring gene tyrosine-protein phosphatase non-receptor type 1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in adiponectin-activated signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within retinal rod cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    adiponectin receptor protein 1b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213500.1NP_998665.1  adiponectin receptor protein 1b

      See identical proteins and their annotated locations for NP_998665.1

      Status: PROVISIONAL

      Source sequence(s)
      BC044388
      UniProtKB/TrEMBL
      Q803Q0
      Related
      ENSDARP00000062681.4, ENSDART00000062682.6
      Conserved Domains (1) summary
      pfam03006
      Location:131354
      HlyIII; Haemolysin-III related

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      28358161..28365548
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)