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    prr14 proline rich 14 [ Danio rerio (zebrafish) ]

    Gene ID: 100001119, updated on 9-Dec-2024

    Summary

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    Official Symbol
    prr14provided by ZNC
    Official Full Name
    proline rich 14provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3785
    See related
    Ensembl:ENSDARG00000089232 AllianceGenome:ZFIN:ZDB-GENE-030131-3785
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc54b01; wu:fc54b01
    Summary
    Orthologous to several human genes including PRR14 (proline rich 14). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See prr14 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (32842777..32855371)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (32711023..32723652)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene PH domain containing endocytic trafficking adaptor 2 Neighboring gene CD2 (cytoplasmic tail) binding protein 2 Neighboring gene si:dkey-16l2.20 Neighboring gene RUS family member 1 Neighboring gene zgc:113090

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. A Toolbox for Efficient Proximity-Dependent Biotinylation in Zebrafish Embryos. Rosenthal SM, et al. Mol Cell Proteomics, 2021. PMID 34332124, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    serine-rich adhesin for platelets; uro-adherence factor A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      32842777..32855371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021474311.2 → XP_021329986.1  serine-rich adhesin for platelets isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q4V6, E7EYB5
      Related
      ENSDARP00000109509.1, ENSDART00000122228.3
      Conserved Domains (1) summary
      pfam15386
      Location:931 → 980
      Tantalus; Drosophila Tantalus-like

    2. XM_021474318.2 → XP_021329993.1  uro-adherence factor A isoform X2

      UniProtKB/TrEMBL
      A0A8M9PSJ3
      Conserved Domains (1) summary
      pfam15386
      Location:930 → 979
      Tantalus; Drosophila Tantalus-like

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394535.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      323864..336458
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001341152.8 → XP_001341188.1  serine-rich adhesin for platelets isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q4V6, E7EYB5
      Conserved Domains (1) summary
      pfam15386
      Location:931 → 980
      Tantalus; Drosophila Tantalus-like

    2. XM_005164082.5 → XP_005164139.1  uro-adherence factor A isoform X2

      UniProtKB/TrEMBL
      A0A8M9PSJ3
      Conserved Domains (1) summary
      pfam15386
      Location:930 → 979
      Tantalus; Drosophila Tantalus-like

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395227.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      203104..215732
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473975.2 → XP_021329650.1  serine-rich adhesin for platelets isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q8N4
      Conserved Domains (1) summary
      pfam15386
      Location:931 → 980
      Tantalus; Drosophila Tantalus-like

    2. XM_021473976.2 → XP_021329651.1  serine-rich adhesin for platelets isoform X2

      UniProtKB/TrEMBL
      A0A8M9Q4C3
      Conserved Domains (1) summary
      pfam15386
      Location:930 → 979
      Tantalus; Drosophila Tantalus-like
    Nucleotide Protein Strain
    Heading Accession and Version

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