wdr77 WD repeat domain 77 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: wdr77provided by ZNC
Official Full Name: WD repeat domain 77provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1417
See related: AllianceGenome:ZFIN:ZDB-GENE-040426-1417
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:65780; zgc:77274
Summary: Predicted to be located in cytoplasm. Orthologous to human WDR77 (WD repeat domain 77). [provided by Alliance of Genome Resources, Dec 2024]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: Un

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	Unplaced Scaffold	NW_003336633.1 (22449..34620, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_003336633.1 (22449..34620, complement)

NW_003336633.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in oocyte axis specification	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
part_of methylosome	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: methylosome protein WDR77

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200534.1 → NP_956828.1 methylosome protein WDR77

See identical proteins and their annotated locations for NP_956828.1

Status: PROVISIONAL

Source sequence(s)

BC056278

UniProtKB/TrEMBL

Q7SZR9

Conserved Domains (3) summary

COG2319
Location:1 → 312

WD40; WD40 repeat [General function prediction only]

sd00039
Location:74 → 113

7WD40; WD40 repeat [structural motif]

cl02567
Location:70 → 309

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...