U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cfap90 cilia and flagella associated protein 90 [ Danio rerio (zebrafish) ]

    Gene ID: 100317613, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    cfap90provided by ZNC
    Official Full Name
    cilia and flagella associated protein 90provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060503-559
    See related
    Ensembl:ENSDARG00000115108 AllianceGenome:ZFIN:ZDB-GENE-060503-559
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    si:dkeyp-46h3.1
    Summary
    Orthologous to human CFAP90 (cilia and flagella associated protein 90). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See cfap90 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (27589303..27605702)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (28005031..28022019)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:dkeyp-46h3.3 Neighboring gene si:dkeyp-46h3.2 Neighboring gene adenylate cyclase 2b (brain) Neighboring gene terminal nucleotidyltransferase 4A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    cilia- and flagella-associated protein 90

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      27589303..27605702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002665531.5 → XP_002665577.1  cilia- and flagella-associated protein 90

      UniProtKB/TrEMBL
      A0A2R8RPL3, A0A8M1RRN8
      Related
      ENSDARP00000150062.1, ENSDART00000182060.1
      Conserved Domains (1) summary
      pfam15074
      Location:33 → 120
      DUF4541; Domain of unknown function (DUF4541)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools