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    wu:fa19b12 wu:fa19b12 [ Danio rerio (zebrafish) ]

    Gene ID: 560551, updated on 3-Dec-2024

    Summary

    Official Symbol
    wu:fa19b12provided by ZNC
    Official Full Name
    wu:fa19b12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5231
    See related
    Ensembl:ENSDARG00000105278 AllianceGenome:ZFIN:ZDB-GENE-030131-5231
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fa19b12
    Orthologs
    NEW
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    Genomic context

    See wu:fa19b12 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (25311274..25314752)
    105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003334369.1 (36068..39548, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103910306 Neighboring gene carnosine N-methyltransferase 1 Neighboring gene transient receptor potential cation channel, subfamily M, member 6 Neighboring gene uncharacterized LOC110439811 Neighboring gene RAR-related orphan receptor B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC560551

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001281985.1NP_001268914.1  uncharacterized protein LOC560551

      Status: VALIDATED

      Source sequence(s)
      EH486517, EH512912
      UniProtKB/TrEMBL
      A0A0R4IRB0, A0A8M1P052
      Related
      ENSDARP00000137060.1, ENSDART00000169638.2
      Conserved Domains (1) summary
      pfam15017
      Location:127154
      AF1Q; Drug resistance and apoptosis regulator

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      25311274..25314752
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221222.1XP_068077323.1  uncharacterized protein LOC560551 isoform X1

      UniProtKB/TrEMBL
      A0A0R4IRB0, A0A8M1P052

    RNA

    1. XR_224841.3 RNA Sequence

    2. XR_011015320.1 RNA Sequence