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    dqx1 DEAQ box RNA-dependent ATPase 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100002601, updated on 4-Jan-2025

    Summary

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    Official Symbol
    dqx1provided by ZNC
    Official Full Name
    DEAQ box RNA-dependent ATPase 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-150224-1
    See related
    AllianceGenome:ZFIN:ZDB-GENE-150224-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable ATP binding activity; helicase activity; and hydrolase activity. Orthologous to human DQX1 (DEAQ-box RNA dependent ATPase 1). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    all
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    Genomic context

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    See dqx1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (72068619..72080161, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (71282329..71295754, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene proline-rich coiled-coil 2B Neighboring gene ATP-dependent RNA helicase DQX1-like Neighboring gene oxytocin Neighboring gene threonine synthase-like 2 Neighboring gene fatty acid binding protein 1a, liver

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ATP-dependent RNA helicase DQX1
    Names
    DEAQ box polypeptide 1 (RNA-dependent ATPase)
    XP_021332040.2
    XP_068077682.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      72068619..72080161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021476365.2 → XP_021332040.2  ATP-dependent RNA helicase DQX1

    2. XM_068221581.1 → XP_068077682.1  ATP-dependent RNA helicase DQX1

    Nucleotide Protein Strain
    Heading Accession and Version

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