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    Pos Poseidon [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43762, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Posprovided by FlyBase
    Official Full Name
    Poseidonprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039887
    Locus tag
    Dmel_CG2053
    See related
    AllianceGenome:FB:FBgn0039887
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG2053; Dmel\CG2053; Pose
    Summary
    Predicted to be involved in negative regulation of translation. Predicted to be part of CCR4-NOT core complex. Predicted to be active in P-body. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Pos in Genome Data Viewer
    Location:
    100E3-100F1; 3-103 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (32038330..32039753)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27864052..27865475)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene hephaestus Neighboring gene long non-coding RNA:CR45556 Neighboring gene pseudo Neighboring gene kurtz Neighboring gene modulo

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rapid Gene Evolution in an Ancient Post-transcriptional and Translational Regulatory System Compensates for Meiotic X Chromosomal Inactivation. Xia S, et al. Mol Biol Evol, 2022 Jan 7. PMID 34626117, Free PMC Article
    2. Identification of circadian-clock-regulated enhancers and genes of Drosophila melanogaster by transposon mobilization and luciferase reporting of cyclical gene expression. Stempfl T, et al. Genetics, 2002 Feb. PMID 11861563, Free PMC Article
    3. Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase. Fukuoh A, et al. Mol Syst Biol, 2014 Jun 21. PMID 24952591, Free PMC Article
    4. Genome-wide phenotypic RNAi screen in the Drosophila wing: phenotypic description of functional classes. López-Varea A, et al. G3 (Bethesda), 2021 Dec 8. PMID 34599810, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in negative regulation of translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of CCR4-NOT core complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in P-body IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    poseidon
    Names
    CG2053-PA
    CG2053-PB
    Pos-PA
    Pos-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      32038330..32039753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300703.1 → NP_001287632.1  poseidon, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287632.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V9S3
      Conserved Domains (1) summary
      pfam04078
      Location:28 → 258
      Rcd1; Cell differentiation family, Rcd1-like

    2. NM_143647.2 → NP_651904.2  poseidon, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651904.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V9S3
      Related
      FBpp0085232
      Conserved Domains (1) summary
      pfam04078
      Location:28 → 258
      Rcd1; Cell differentiation family, Rcd1-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V9S3 Q9V9S3

    Gene LinkOut

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