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    Ribosomal protein S30 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829060, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Ribosomal protein S30 family protein
    Primary source
    TAIR:AT4G29390
    Locus tag
    AT4G29390
    See related
    Araport:AT4G29390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17A13.210; F17A13_210
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (14464856..14466029, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene profilin 2 Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene protein kinase family protein / WD-40 repeat family protein Neighboring gene oxidoreductase/transition metal ion-binding protein (DUF3531) Neighboring gene Ribosomal L28e protein family Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. Pendle AF, et al. Mol Biol Cell, 2005 Jan. PMID 15496452, Free PMC Article
    2. Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. Carroll AJ, et al. Mol Cell Proteomics, 2008 Feb. PMID 17934214
    3. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    4. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119084.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    part_of cytosolic small ribosomal subunit HDA PubMed 
    located_in nucleolus HDA PubMed 
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    Ribosomal protein S30 family protein
    NP_194668.1
    • Ribosomal protein S30 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, ribosome, nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30 (InterPro:IPR006846); BEST Arabidopsis thaliana protein match is: Ribosomal protein S30 family protein (TAIR:AT5G56670.1); Has 682 Blast hits to 682 proteins in 246 species: Archae - 2; Bacteria - 0; Metazoa - 304; Fungi - 135; Plants - 106; Viruses - 1; Other Eukaryotes - 134 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14464856..14466029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119084.3 → NP_194668.1  Ribosomal protein S30 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194668.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82203, P49689, Q9M0E4
      UniProtKB/TrEMBL
      A0A178V0S4, A0A384L8A2, Q0WWR7
      Conserved Domains (1) summary
      pfam04758
      Location:3 → 59
      Ribosomal_S30; Ribosomal protein S30
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P49689.3

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