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    CG30428 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 246608, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG30428provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0050428
    Locus tag
    Dmel_CG30428
    See related
    AllianceGenome:FB:FBgn0050428
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:SD21514; Dmel\CG30428
    Summary
    Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG30428 in Genome Data Viewer
    Location:
    60F5-60F5; 2-107 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (25251927..25254535)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (21139450..21142058)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Juvenile hormone binding protein 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Brakeless co-regulator can directly activate and repress transcription in early Drosophila embryos. Crona F, et al. Dev Biol, 2015 Nov 1. PMID 26260775
    2. Mechanisms of HP1-mediated gene silencing in Drosophila. Danzer JR, et al. Development, 2004 Aug. PMID 15215206
    3. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 25252327-25252401 mobile_element_type = transposon:INE-1{}3461
    • Loc: 25252921-25252957 mobile_element_type = transposon:1360{}3471

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG30428-PA
    CG30428-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      25251927..25254535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299951.1 → NP_001286880.1  uncharacterized protein Dmel_CG30428, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286880.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LGM2, Q8IG86
      Conserved Domains (1) summary
      cl23759
      Location:1 → 57
      GT1; GT1, myb-like, SANT family

    2. NM_166709.4 → NP_726513.1  uncharacterized protein Dmel_CG30428, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726513.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IG86, Q8MLN2
      Related
      FBpp0072353
      Conserved Domains (1) summary
      cl23759
      Location:2 → 73
      GT1; GT1, myb-like, SANT family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LGM2 A0A0B4LGM2
    Q8IG86 Q8IG86
    Q8MLN2 Q8MLN2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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