NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_027894.1 RefSeqGene
- Range
-
4289..107199
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001282237.2 → NP_001269166.1 B-cell lymphoma/leukemia 11B isoform 3
See identical proteins and their annotated locations for NP_001269166.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) uses an alternate in-frame splice junction at the 5' end of an exon compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is 1 aa shorter compared to isoform 1.
- Source sequence(s)
-
AB057668, AJ404614, AL109767
- UniProtKB/TrEMBL
-
L8B8F6
- Conserved Domains (4) summary
-
- sd00017
Location:797 → 817
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:428 → 448
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:796 → 817
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:809 → 834
- zf-H2C2_2; Zinc-finger double domain
-
NM_001282238.2 → NP_001269167.1 B-cell lymphoma/leukemia 11B isoform 4
See identical proteins and their annotated locations for NP_001269167.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice junction at the 5' end of an exon and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (4) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AB057670, AJ404614, AL109767
- UniProtKB/TrEMBL
- D3YTK1, L8B862
- Conserved Domains (4) summary
-
- sd00017
Location:726 → 746
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:357 → 377
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:725 → 746
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:738 → 763
- zf-H2C2_2; Zinc-finger double domain
-
NM_022898.3 → NP_075049.1 B-cell lymphoma/leukemia 11B isoform 2
See identical proteins and their annotated locations for NP_075049.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AB057669, AJ404614, AL109767
- Consensus CDS
-
CCDS9949.1
- UniProtKB/TrEMBL
- D3YTK1, L8B567
- Related
- ENSP00000280435.6, ENST00000345514.2
- Conserved Domains (4) summary
-
- sd00017
Location:727 → 747
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:358 → 378
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:726 → 747
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:739 → 764
- zf-H2C2_2; Zinc-finger double domain
-
NM_138576.4 → NP_612808.1 B-cell lymphoma/leukemia 11B isoform 1
See identical proteins and their annotated locations for NP_612808.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AB041218, AB043584, AJ404614, AL109767
- Consensus CDS
-
CCDS9950.1
- UniProtKB/Swiss-Prot
- Q9C0K0, Q9H162
- UniProtKB/TrEMBL
-
L8B7P7
- Related
- ENSP00000349723.3, ENST00000357195.8
- Conserved Domains (4) summary
-
- sd00017
Location:798 → 818
- ZF_C2H2; C2H2 Zn finger [structural motif]
- sd00019
Location:429 → 449
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:797 → 818
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:810 → 835
- zf-H2C2_2; Zinc-finger double domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
99169287..99272197 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047431708.1 → XP_047287664.1 B-cell lymphoma/leukemia 11B isoform X2
- UniProtKB/TrEMBL
-
D3YTK1
-
XM_047431707.1 → XP_047287663.1 B-cell lymphoma/leukemia 11B isoform X1
- UniProtKB/TrEMBL
-
D3YTK1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
93400844..93503767 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054376624.1 → XP_054232599.1 B-cell lymphoma/leukemia 11B isoform X2
- UniProtKB/TrEMBL
-
D3YTK1
-
XM_054376623.1 → XP_054232598.1 B-cell lymphoma/leukemia 11B isoform X1
- UniProtKB/TrEMBL
-
D3YTK1