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    Mc2r melanocortin 2 receptor [ Rattus norvegicus (Norway rat) ]

    Gene ID: 282839, updated on 9-Dec-2024

    Summary

    Official Symbol
    Mc2rprovided by RGD
    Official Full Name
    melanocortin 2 receptorprovided by RGD
    Primary source
    RGD:628649
    See related
    EnsemblRapid:ENSRNOG00000072071 AllianceGenome:RGD:628649
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable G protein-coupled receptor activity. Involved in placenta development. Predicted to be active in cytoplasm and plasma membrane. Biomarker of toxic shock syndrome. Human ortholog(s) of this gene implicated in West syndrome and glucocorticoid deficiency 1. Orthologous to human MC2R (melanocortin 2 receptor). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 393.7) and Muscle (RPKM 25.0) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mc2r in Genome Data Viewer
    Location:
    18q12.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (64279878..64291775, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (62001980..62015567, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (64166959..64178729, complement)

    Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene RNA (guanine-7-) methyltransferase Neighboring gene melanocortin 5 receptor Neighboring gene uncharacterized LOC102548061 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables corticotropin receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    adrenocorticotropic hormone receptor
    Names
    melanocortin 2 receptor (adrenocorticotropic hormone)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100491.1NP_001093961.1  adrenocorticotropic hormone receptor

      See identical proteins and their annotated locations for NP_001093961.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000018
      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Related
      ENSRNOP00000103356.1, ENSRNOT00000135912.1
      Conserved Domains (1) summary
      cd15350
      Location:25287
      7tmA_MC2R_ACTH_R; melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086036.1 Reference GRCr8

      Range
      64279878..64291775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063277136.1XP_063133206.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    2. XM_063277135.1XP_063133205.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Related
      ENSRNOP00000102791.1, ENSRNOT00000126493.1
    3. XM_063277140.1XP_063133210.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    4. XM_063277137.1XP_063133207.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Related
      ENSRNOP00000111537.1, ENSRNOT00000164299.1
    5. XM_063277138.1XP_063133208.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Related
      ENSRNOP00000103024.1, ENSRNOT00000134916.1
    6. XM_063277139.1XP_063133209.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    7. XM_008772094.4XP_008770316.1  adrenocorticotropic hormone receptor isoform X1

      See identical proteins and their annotated locations for XP_008770316.1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Conserved Domains (1) summary
      cd15350
      Location:25287
      7tmA_MC2R_ACTH_R; melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
    8. XM_008772095.4XP_008770317.1  adrenocorticotropic hormone receptor isoform X1

      See identical proteins and their annotated locations for XP_008770317.1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
      Related
      ENSRNOP00000110155.1, ENSRNOT00000148665.1
      Conserved Domains (1) summary
      cd15350
      Location:25287
      7tmA_MC2R_ACTH_R; melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors
    9. XM_063277141.1XP_063133211.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    10. XM_063277144.1XP_063133214.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    11. XM_063277143.1XP_063133213.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    12. XM_063277142.1XP_063133212.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6
    13. XM_063277145.1XP_063133215.1  adrenocorticotropic hormone receptor isoform X1

      UniProtKB/TrEMBL
      A6IXY0, G3V848, Q8CIX6