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    Tlr11 toll-like receptor 11 [ Mus musculus (house mouse) ]

    Gene ID: 239081, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tlr11provided by MGI
    Official Full Name
    toll-like receptor 11provided by MGI
    Primary source
    MGI:MGI:3045226
    See related
    Ensembl:ENSMUSG00000051969 AllianceGenome:MGI:3045226
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm287
    Summary
    Predicted to enable signaling receptor activity. Acts upstream of or within response to bacterium. Predicted to be located in membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in spleen adult (RPKM 1.4), mammary gland adult (RPKM 1.0) and 11 other tissues See more
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    Genomic context

    See Tlr11 in Genome Data Viewer
    Location:
    14 C1; 14 26.07 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (50595371..50601120)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (50357914..50363663)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily M member 1 Neighboring gene olfactory receptor family 4 subfamily Q member 3 Neighboring gene olfactory receptor family 11 subfamily J member 4 Neighboring gene olfactory receptor 737, pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC129352, MGC129353

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables NAD+ nucleotidase, cyclic ADP-ribose generating IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables signaling receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in inflammatory response IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
     
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in toll-like receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    toll-like receptor 11
    Names
    toll-like receptor 12
    NP_991388.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205819.3NP_991388.2  toll-like receptor 11

      Status: VALIDATED

      Source sequence(s)
      AC135188, AI646605, AY510704
      Consensus CDS
      CCDS27012.2
      UniProtKB/Swiss-Prot
      Q6R5P0
      UniProtKB/TrEMBL
      V9GWT0
      Related
      ENSMUSP00000138814.2, ENSMUST00000185091.2
      Conserved Domains (4) summary
      cd00116
      Location:184427
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:224246
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13676
      Location:781861
      TIR_2; TIR domain
      pfam13855
      Location:366426
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      50595371..50601120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)