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    Grip2 glutamate receptor interacting protein 2 [ Mus musculus (house mouse) ]

    Gene ID: 243547, updated on 9-Dec-2024

    Summary

    Official Symbol
    Grip2provided by MGI
    Official Full Name
    glutamate receptor interacting protein 2provided by MGI
    Primary source
    MGI:MGI:2681173
    See related
    Ensembl:ENSMUSG00000030098 AllianceGenome:MGI:2681173
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable glutamate receptor binding activity. Involved in neurotransmitter receptor transport, endosome to postsynaptic membrane and vesicle-mediated transport in synapse. Acts upstream of or within Notch signaling pathway; artery smooth muscle contraction; and positive regulation of blood pressure. Is active in glutamatergic synapse. Is expressed in diencephalon lateral wall mantle layer; olfactory cortex mantle layer; and tongue. Orthologous to human GRIP2 (glutamate receptor interacting protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in frontal lobe adult (RPKM 10.3), CNS E18 (RPKM 10.0) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Grip2 in Genome Data Viewer
    Location:
    6 D1; 6 40.8 cM
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (91738433..91820884, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (91761452..91843954, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:91629122-91629420 Neighboring gene predicted gene, 40387 Neighboring gene predicted gene, 30628 Neighboring gene STARR-seq mESC enhancer starr_16652 Neighboring gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6 Neighboring gene STARR-seq mESC enhancer starr_16656 Neighboring gene STARR-seq mESC enhancer starr_16660 Neighboring gene coiled-coil domain containing 174 Neighboring gene STARR-positive B cell enhancer ABC_E6456 Neighboring gene RIKEN cDNA 4930590J08 gene Neighboring gene predicted gene, 53299

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables glutamate receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within Notch signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within artery smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of AMPA glutamate receptor clustering ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of excitatory postsynaptic potential ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of neuron maturation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in vesicle-mediated transport in synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in vesicle-mediated transport in synapse IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in vesicle-mediated transport in synapse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendritic shaft ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in glutamatergic synapse IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    is_active_in glutamatergic synapse IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuron spine ISO
    Inferred from Sequence Orthology
    more info
     
    located_in neuronal cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density ISO
    Inferred from Sequence Orthology
    more info
     
    located_in postsynaptic density ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic density, intracellular component ISO
    Inferred from Sequence Orthology
    more info
     
    located_in postsynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    glutamate receptor-interacting protein 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001159507.2NP_001152979.1  glutamate receptor-interacting protein 2 isoform 1

      See identical proteins and their annotated locations for NP_001152979.1

      Status: VALIDATED

      Source sequence(s)
      AC162914
      Consensus CDS
      CCDS51852.1
      UniProtKB/TrEMBL
      E0CXS4, G3XA20
      Related
      ENSMUSP00000124709.2, ENSMUST00000162300.8
      Conserved Domains (1) summary
      cd00992
      Location:657737
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    2. NM_001411663.1NP_001398592.1  glutamate receptor-interacting protein 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC162914, AC168852
      UniProtKB/TrEMBL
      E0CXS4
    3. NM_001411664.1NP_001398593.1  glutamate receptor-interacting protein 2 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC162914
      UniProtKB/TrEMBL
      E0CXS4

    RNA

    1. NR_177446.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC162914
    2. NR_177447.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC162914
      Related
      ENSMUST00000162293.8
    3. NR_177448.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC162914

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      91738433..91820884 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006506103.4XP_006506166.1  glutamate receptor-interacting protein 2 isoform X2

      UniProtKB/TrEMBL
      E0CXS4
      Conserved Domains (1) summary
      cd00992
      Location:664744
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

    RNA

    1. XR_003956198.1 RNA Sequence

    2. XR_004942951.1 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001033353.1: Suppressed sequence

      Description
      NM_001033353.1: This RefSeq was permanently suppressed because it is primarily UTR sequence.