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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001252573.1 → NP_001239502.1 solute carrier family 35 member C2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). Variants 1, 2, 3, 5, and 6 all encode the same isoform (1).
- Source sequence(s)
-
AL591430
- Consensus CDS
-
CCDS17074.1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Related
- ENSMUSP00000104921.2, ENSMUST00000109298.8
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
NM_001252574.1 → NP_001239503.1 solute carrier family 35 member C2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) uses an alternate splice site in the 5' UTR compared to variant 1. Variants 1, 2, 3, 5, and 6 all encode the same isoform (1).
- Source sequence(s)
-
AL591430
- Consensus CDS
-
CCDS17074.1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Related
- ENSMUSP00000104922.2, ENSMUST00000109299.8
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
NM_001252575.1 → NP_001239504.1 solute carrier family 35 member C2 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, uses an alternate splice site and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (2) has a shorter N-terminus, compared to isoform 1.
- Source sequence(s)
-
AK053180, BB772752, BB849961
- Conserved Domains (1) summary
-
- pfam03151
Location:3 → 199
- TPT; Triose-phosphate Transporter family
-
NM_001363015.1 → NP_001349944.1 solute carrier family 35 member C2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5), as well as variants 1, 2, 3, and 6, encodes isoform 1.
- Source sequence(s)
-
AL591430
- Consensus CDS
-
CCDS17074.1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Related
- ENSMUSP00000017808.8, ENSMUST00000017808.14
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
NM_001363016.1 → NP_001349945.1 solute carrier family 35 member C2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (6), as well as variants 1, 2, 3, and 5, encodes isoform 1.
- Source sequence(s)
-
AL591430
- Consensus CDS
-
CCDS17074.1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
NM_144893.2 → NP_659142.1 solute carrier family 35 member C2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3, 5, and 6 all encode the same isoform (1).
- Source sequence(s)
-
AK160899, BB772752, BB849961, BE952356
- Consensus CDS
-
CCDS17074.1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Related
- ENSMUSP00000104923.3, ENSMUST00000109300.9
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
165118442..165129808 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006499371.4 → XP_006499434.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_030250667.2 → XP_030106527.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_030250672.2 → XP_030106532.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_036161632.1 → XP_036017525.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_006499372.5 → XP_006499435.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_006499375.5 → XP_006499438.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_030250671.2 → XP_030106531.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
-
XM_030250673.2 → XP_030106533.1 solute carrier family 35 member C2 isoform X1
- UniProtKB/Swiss-Prot
-
Q8VCX2
- UniProtKB/TrEMBL
- Q3U226, Q5GMH2
- Conserved Domains (1) summary
-
- cd21092
Location:80 → 327
- TPT_S35C2; solute carrier family 35 member C2, member of the triose-phosphate transporter family
RNA
-
XR_003952694.2 RNA Sequence
-
XR_001782366.1 RNA Sequence
- Related
-
ENSMUST00000132270.8
-
XR_004940155.1 RNA Sequence
-
XR_004940156.1 RNA Sequence