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    Mzb1 marginal zone B and B1 cell-specific protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 69816, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mzb1provided by MGI
    Official Full Name
    marginal zone B and B1 cell-specific protein 1provided by MGI
    Primary source
    MGI:MGI:1917066
    See related
    Ensembl:ENSMUSG00000024353 AllianceGenome:MGI:1917066
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PACAP; pERp1; 2010001M09Rik
    Summary
    Involved in several processes, including integrin activation; positive regulation of immunoglobulin production; and regulation of B cell proliferation. Located in endoplasmic reticulum lumen and extracellular region. Part of endoplasmic reticulum chaperone complex. Is expressed in thymus primordium. Orthologous to human MZB1 (marginal zone B and B1 cell specific protein). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in spleen adult (RPKM 34.5), large intestine adult (RPKM 13.7) and 7 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Mzb1 in Genome Data Viewer
    Location:
    18 B2; 18 19.19 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (35780318..35782420, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (35647265..35650266, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, H/ACA box 74A Neighboring gene small nucleolar RNA host gene 4 Neighboring gene matrin 3 Neighboring gene STARR-positive B cell enhancer ABC_E9973 Neighboring gene STARR-positive B cell enhancer ABC_E5651 Neighboring gene polyadenylate-binding protein-interacting protein 2 Neighboring gene solute carrier family 23 (nucleobase transporters), member 1 Neighboring gene STARR-seq mESC enhancer starr_44241 Neighboring gene STARR-seq mESC enhancer starr_44242 Neighboring gene STARR-positive B cell enhancer ABC_E7578 Neighboring gene proline rich basic protein 1 Neighboring gene spermatogenesis associated 24

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Clone Names

    • MGC73549

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    part_of endoplasmic reticulum chaperone complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of endoplasmic reticulum chaperone complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in extracellular region IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    marginal zone B- and B1-cell-specific protein
    Names
    plasma cell-induced ER protein 1
    plasma cell-induced resident ER protein
    plasma cell-induced resident endoplasmic reticulum protein
    proapoptotic caspase adapter protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027222.3NP_081498.2  marginal zone B- and B1-cell-specific protein precursor

      See identical proteins and their annotated locations for NP_081498.2

      Status: VALIDATED

      Source sequence(s)
      AA866731, AK008016, BC064044
      Consensus CDS
      CCDS29145.1
      UniProtKB/Swiss-Prot
      D2IYS1, Q6P3D3, Q8BU13, Q8K2M5, Q9D8I1
      Related
      ENSMUSP00000025211.5, ENSMUST00000025211.6
      Conserved Domains (1) summary
      pfam11938
      Location:48171
      DUF3456; TLR4 regulator and MIR-interacting MSAP

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      35780318..35782420 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)