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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001135691.3 → NP_001129163.1 chromaffin granule amine transporter isoform a
See identical proteins and their annotated locations for NP_001129163.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript, and encodes the longest protein (isoform a). Variants 1 and 2 both encode the same protein.
- Source sequence(s)
-
AC025853, BC006317, BC009387, U39905
- Consensus CDS
-
CCDS6013.1
- UniProtKB/Swiss-Prot
- E9PDJ5, P54219, Q9BRE4
- UniProtKB/TrEMBL
-
B2R9B6
- Related
- ENSP00000387549.1, ENST00000440926.3
- Conserved Domains (3) summary
-
- cd06174
Location:302 → 479
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- TIGR00880
Location:140 → 281
- 2_A_01_02; Multidrug resistance protein
- pfam07690
Location:139 → 445
- MFS_1; Major Facilitator Superfamily
-
NM_001142324.2 → NP_001135796.1 chromaffin granule amine transporter isoform b
See identical proteins and their annotated locations for NP_001135796.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon in the central coding region, compared to variant 1. The resulting isoform (b) has the same N- and C-termini but lacks an internal segment, compared to isoform a.
- Source sequence(s)
-
AC025853, BC006317, BC009387, U39905
- Consensus CDS
-
CCDS47814.1
- UniProtKB/TrEMBL
-
B2R9B6
- Related
- ENSP00000265808.7, ENST00000265808.11
- Conserved Domains (3) summary
-
- cd06174
Location:305 → 447
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- TIGR00880
Location:140 → 281
- 2_A_01_02; Multidrug resistance protein
- pfam07690
Location:139 → 413
- MFS_1; Major Facilitator Superfamily
-
NM_001142325.2 → NP_001135797.1 chromaffin granule amine transporter isoform c
See identical proteins and their annotated locations for NP_001135797.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4), also known as VMAT1delta15, lacks an alternate exon in the 3' coding region resulting in a frameshift, compared to variant 1. The resulting isoform (c) has a shorter and distinct C-terminus, compared to isoform a.
- Source sequence(s)
-
AC025853, BC006317, BC009387, U39905
- Consensus CDS
-
CCDS47815.1
- UniProtKB/TrEMBL
-
Q96GL6
- Related
- ENSP00000413361.1, ENST00000437980.3
- Conserved Domains (3) summary
-
- cd06174
Location:302 → 445
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- TIGR00880
Location:140 → 281
- 2_A_01_02; Multidrug resistance protein
- pfam07690
Location:139 → 444
- MFS_1; Major Facilitator Superfamily
-
NM_003053.4 → NP_003044.1 chromaffin granule amine transporter isoform a
See identical proteins and their annotated locations for NP_003044.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein (isoform a).
- Source sequence(s)
-
AC025853, BC006317, BC009387, U39905
- Consensus CDS
-
CCDS6013.1
- UniProtKB/Swiss-Prot
- E9PDJ5, P54219, Q9BRE4
- UniProtKB/TrEMBL
-
B2R9B6
- Related
- ENSP00000276373.5, ENST00000276373.10
- Conserved Domains (3) summary
-
- cd06174
Location:302 → 479
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- TIGR00880
Location:140 → 281
- 2_A_01_02; Multidrug resistance protein
- pfam07690
Location:139 → 445
- MFS_1; Major Facilitator Superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
20144855..20183136 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422119.1 → XP_047278075.1 chromaffin granule amine transporter isoform X3
- UniProtKB/TrEMBL
-
B2R9B6
-
XM_011544625.2 → XP_011542927.1 chromaffin granule amine transporter isoform X1
- UniProtKB/TrEMBL
-
B2R9B6
- Conserved Domains (2) summary
-
- cd06174
Location:139 → 451
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- pfam07690
Location:139 → 417
- MFS_1; Major Facilitator Superfamily
-
XM_011544626.2 → XP_011542928.1 chromaffin granule amine transporter isoform X2
See identical proteins and their annotated locations for XP_011542928.1
- UniProtKB/TrEMBL
-
B2R9B6
- Related
- ENSP00000429664.1, ENST00000519026.5
- Conserved Domains (3) summary
-
- cd06174
Location:305 → 447
- MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
- TIGR00880
Location:140 → 281
- 2_A_01_02; Multidrug resistance protein
- pfam07690
Location:139 → 413
- MFS_1; Major Facilitator Superfamily
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
20409985..20448250 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361043.1 → XP_054217018.1 chromaffin granule amine transporter isoform X3
- UniProtKB/TrEMBL
-
B2R9B6
-
XM_054361041.1 → XP_054217016.1 chromaffin granule amine transporter isoform X1
- UniProtKB/TrEMBL
-
B2R9B6
-
XM_054361042.1 → XP_054217017.1 chromaffin granule amine transporter isoform X2
- UniProtKB/TrEMBL
-
B2R9B6