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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001045556.3 → NP_001039021.1 src-like-adapter isoform a
See identical proteins and their annotated locations for NP_001039021.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes isoform (a).
- Source sequence(s)
-
BX648382, D89077, DB265860, U44403
- Consensus CDS
-
CCDS6370.1
- UniProtKB/Swiss-Prot
- B7Z4J2, B7Z4L6, Q13239, Q6FI01, Q9UMQ8
- UniProtKB/TrEMBL
-
Q5TZW1
- Related
- ENSP00000337548.5, ENST00000338087.10
- Conserved Domains (2) summary
-
- cd10344
Location:73 → 170
- SH2_SLAP; Src homology 2 domain found in Src-like adaptor proteins
- cd12010
Location:26 → 80
- SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein
-
NM_001045557.3 → NP_001039022.2 src-like-adapter isoform b
See identical proteins and their annotated locations for NP_001039022.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate 5' exon and uses an upstream translation initiation codon, compared to variant 1. The resulting isoform (b) is longer at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AF305872, BX648382, U44403
- Consensus CDS
-
CCDS47922.1
- UniProtKB/TrEMBL
-
Q5TZW1
- Related
- ENSP00000378759.3, ENST00000395352.7
- Conserved Domains (2) summary
-
- cd10344
Location:90 → 187
- SH2_SLAP; Src homology 2 domain found in Src-like adaptor proteins
- cd12010
Location:43 → 97
- SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein
-
NM_001282964.2 → NP_001269893.1 src-like-adapter isoform d
See identical proteins and their annotated locations for NP_001269893.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and lacks an in-frame exon in the centtral coding region compared to variant 1. These differences result in the use of an upstream start codon compared to varian 1. The encoded isoform (d) is shorter but has an extended N-terminus compare to isoform a.
- Source sequence(s)
-
AF305872, AK297423, AW137142
- Consensus CDS
-
CCDS64978.1
- UniProtKB/TrEMBL
-
Q5TZW1
- Related
- ENSP00000428559.1, ENST00000517648.5
- Conserved Domains (2) summary
-
- cd12010
Location:43 → 97
- SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein
- cl15255
Location:90 → 134
- SH2; Src homology 2 (SH2) domain
-
NM_001282965.2 → NP_001269894.1 src-like-adapter isoform e
See identical proteins and their annotated locations for NP_001269894.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) lacks an exon in the 5' UTR which results in the use of an downstream start codon compared to variant 1. The encodoed isoform (e) has a shorter N-terminus compared to isoform a.
- Source sequence(s)
-
AF305872, AK297519, AW137142
- Consensus CDS
-
CCDS64977.1
- UniProtKB/Swiss-Prot
-
Q13239
- Related
- ENSP00000427928.1, ENST00000524345.5
- Conserved Domains (1) summary
-
- cl15255
Location:1 → 62
- SH2; Src homology 2 (SH2) domain
-
NM_006748.4 → NP_006739.2 src-like-adapter isoform c
See identical proteins and their annotated locations for NP_006739.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and 5' coding region, compared to variant 1. The resulting isoform (c) is longer at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AF305872, BC007042, BX648382, DA999385, U44403
- Consensus CDS
-
CCDS47923.1
- UniProtKB/TrEMBL
-
Q5TZW1
- Related
- ENSP00000394049.2, ENST00000427060.6
- Conserved Domains (2) summary
-
- cd10344
Location:113 → 210
- SH2_SLAP; Src homology 2 domain found in Src-like adaptor proteins
- cd12010
Location:66 → 120
- SH3_SLAP; Src homology 3 domain of Src-Like Adaptor Protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
133036728..133102602 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422110.1 → XP_047278066.1 src-like-adapter isoform X3
-
XM_047422107.1 → XP_047278063.1 src-like-adapter isoform X1
- UniProtKB/Swiss-Prot
- B7Z4J2, B7Z4L6, Q13239, Q6FI01, Q9UMQ8
- UniProtKB/TrEMBL
-
Q5TZW1
-
XM_047422108.1 → XP_047278064.1 src-like-adapter isoform X2
- UniProtKB/TrEMBL
-
Q5TZW1
-
XM_047422109.1 → XP_047278065.1 src-like-adapter isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
134160152..134225947 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361024.1 → XP_054216999.1 src-like-adapter isoform X3
-
XM_054361021.1 → XP_054216996.1 src-like-adapter isoform X1
- UniProtKB/Swiss-Prot
- B7Z4J2, B7Z4L6, Q13239, Q6FI01, Q9UMQ8
- UniProtKB/TrEMBL
-
Q5TZW1
-
XM_054361022.1 → XP_054216997.1 src-like-adapter isoform X2
- UniProtKB/TrEMBL
-
Q5TZW1
-
XM_054361023.1 → XP_054216998.1 src-like-adapter isoform X3