U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Or98b Odorant receptor 98b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43375, updated on 9-Dec-2024

    Summary

    Official Symbol
    Or98bprovided by FlyBase
    Official Full Name
    Odorant receptor 98bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039582
    Locus tag
    Dmel_CG1867
    See related
    AllianceGenome:FB:FBgn0039582
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    98b; 98C.1; CG1867; Dmel\CG1867; DOR121; or98b; Or98bP
    Summary
    Predicted to enable ionotropic olfactory receptor activity and odorant binding activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to be located in dendrite membrane. Predicted to be part of cation channel complex. Predicted to be active in plasma membrane. Is expressed in adult olfactory receptor neuron Or85b/98b. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Or98b in Genome Data Viewer
    Location:
    98C4-98C4; 3-95 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (28352242..28353620)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24177964..24179224)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR46104 Neighboring gene antisense RNA:CR46105 Neighboring gene Moca-cyp Neighboring gene Glutamine:fructose-6-phosphate aminotransferase 2 Neighboring gene long non-coding RNA:CR46106 Neighboring gene beaten path VI Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in detection of chemical stimulus involved in sensory perception of smell ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of cation channel complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    odorant receptor 98b
    Names
    CG1867-PB
    Or98b-PB
    NP_524540.4
    • frameshift, may be evolving pseudogene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      28352242..28353620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079816.4NP_524540.4  odorant receptor 98b [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VAW0
      Conserved Domains (1) summary
      pfam02949
      Location:59372
      7tm_6; 7tm Odorant receptor